Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858084.1_cds_XP_016513724.1_26240
CDS Infomation

[gene=LOC107830614] [db_xref=GeneID:107830614] [protein=mechanosensitive ion channel protein 1, mitochondrial-like isoform X2] [protein_id=XP_016513724.1] [location=join(49786..50375,50473..50750,55335..55435,56652..56759,57596..57817,60116..60217)] [gbkey=CDS]
Sequence

ATGAGGGGTATACACTCTGCTTGTGGGCCCAGTCAGGTTACTCCATATAGTAGGGGGCTA
TTTGATAATAAAAGTTTGAGGGGAAGTATCTCAATTGTTCGGACTAGCCCCGTATGGAAT
AGTCGATGGTATTCATCATCTGTTAATAGTAAAGGAGATATTCTTAAGGGTTCAGAGGTT
TCAGCTGGTGCAACTGGGTCTGATATGGATACAAGTGGTGTTGGTGGAAGTGAATGGATC
GGTAAGGTTAAGGAAGCTTGGCAAACAACCATAGATGCTGTGACTTATACCGGGGAAAAG
GCGAAAGAGGCATCTTCTGAAATGACTCCTTATGTTGAACAAGTGCTTGATGCACACCCT
TATTTGAGAGATGTAATTGTTCCAGTTGGTGGCACTTTAATTGGTACCTTGATGGCTTGG
ATCGTGATGCCAAGGCTTTTGAGGAGATTTCACAAGTACTCAATGCAAGGCCCAGCTGCT
TTGCTGCCTGGAAGCTCAATATGGGGGCAGGTTCCTTATGAGAAAAGTATTTGGGGTGCT
ATGGAGGACCCCGTTCGATATTTGATCACCTTCATGGCATTTTCACAGATCGCGGTGATG
GTGGCACCAAGCACTGTTGCATCGCAATACCTTCTTCAGACTTGGAGAGGTGCTGCTATT
CTTTCATTTGTCTGGTTTCTACAGCGATGGAAAACAAATGTGATAAGTAGAGCTTTGGTT
GTCAAGAGCCTTGAAAAAGGTGACCGTGATCGGTTGTTAACTTTGGACCGAATCTCTTCC
GTTGGCCTCTTCATCCTTGGGCTAATGACTTTAGCTGAAGTTTGTGGAGTAGCCGTACAA
TCTATTCTGACTGTTGGTGGAATTGGAGGGGTGGCTACTGCTTTTGCTGCTAGAGACATC
CTTGGTAATGTTCTCAGTGGACTCTCCGTACAGCTATCACAACCTTTTTCAGTTGGCGAC
ACGATAAAAGCTGGATCAGTGGAAGGTCAAGTGGTTGAAATGGGGCTCACCACCACATCA
TTGTTGACTGCAGAAAAGTTTCCCGTTATTGTCCCAAATTCACTATTTTCCAGCCAGGTG
ATTGTGAATAAATCACGTGCTCAATGGCGTGCTTTGGTCACTACAGTTCCTTTCCAAATT
GAAGAATTCGATAAGATTCTCCAGATTTCAGATGATGTAAAAAACATGCTCAGATCTAAT
CCAAGTGTTTTCTTGGAAAAAGAGGCACCATACTGCTACTTGTCTAAAATAGAAAAAACA
TATGCAGAGCTGACTCTTGGGTGCAACTTAAGATATGCGAGCAAGGACAAATTGTTTTCA
ACACAGCAGGATATTCTTCTGCAAGCAGCCCGAATAATTAAGCAACATGGGGGCAAACTG
GCTGATCCATGGACTCAGTGA

Peptide Sequence

PEP ID

XP_016513724.1
PEP Infomation

PREDICTED: mechanosensitive ion channel protein 1, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MRGIHSACGPSQVTPYSRGLFDNKSLRGSISIVRTSPVWNSRWYSSSVNSKGDILKGSEV
SAGATGSDMDTSGVGGSEWIGKVKEAWQTTIDAVTYTGEKAKEASSEMTPYVEQVLDAHP
YLRDVIVPVGGTLIGTLMAWIVMPRLLRRFHKYSMQGPAALLPGSSIWGQVPYEKSIWGA
MEDPVRYLITFMAFSQIAVMVAPSTVASQYLLQTWRGAAILSFVWFLQRWKTNVISRALV
VKSLEKGDRDRLLTLDRISSVGLFILGLMTLAEVCGVAVQSILTVGGIGGVATAFAARDI
LGNVLSGLSVQLSQPFSVGDTIKAGSVEGQVVEMGLTTTSLLTAEKFPVIVPNSLFSSQV
IVNKSRAQWRALVTTVPFQIEEFDKILQISDDVKNMLRSNPSVFLEKEAPYCYLSKIEKT
YAELTLGCNLRYASKDKLFSTQQDILLQAARIIKQHGGKLADPWTQ

Transcript Sequence

Gene sequence data has not been registered.